Python Module Index

p


	p
	`phe`
	`phe.annotations`
	`phe.annotations.CoverageAnnotator`
	`phe.mapping`
	`phe.mapping.Bowtie2Mapper`
	`phe.mapping.BWAMapper`
	`phe.mapping.mapping_factory`
	`phe.metadata`
	`phe.utils`
	`phe.utils.reader`
	`phe.variant`
	`phe.variant.GATKVariantCaller`
	`phe.variant.MPileupVariantCaller`
	`phe.variant.variant_factory`
	`phe.variant_filters`
	`phe.variant_filters.ADFilter`
	`phe.variant_filters.DepthFilter`
	`phe.variant_filters.DP4Filter`
	`phe.variant_filters.GQFilter`
	`phe.variant_filters.GTFilter`
	`phe.variant_filters.MQ0FFilter`
	`phe.variant_filters.MQ0Filter`
	`phe.variant_filters.MQFilter`
	`phe.variant_filters.QualFilter`